| Tue 09/08/16 | Stockport Town v Chadderton | 3-4 | | | | |
| Sat 13/08/16 | Widnes v Chadderton | 1-2 | | | | |
| Tue 16/08/16 | Chadderton v Prestwich Heys | 3-3 | | | | |
| Sat 20/08/16 | Chadderton v Atherton LR | 3-5 | | | | |
| Wed 24/08/16 | Cheadle Town v Chadderton | 5-4 | | | | |
| Sat 17/09/16 | Chadderton v Cheadle Town | 1-1 | | | | |
| Sat 24/09/16 | Widnes v Chadderton | 1-4 | | | | |
| Tue 27/09/16 | Chadderton v Silsden | 1-2 | | | | |
| Sat 01/10/16 | Whitchurch Alport v Chadderton | 3-0 | | | | |
| Sat 08/10/16 | Bacup Borough v Chadderton | 1-1 | | | | |
| Tue 11/10/16 | Chadderton v Stockport Town | 2-3 | | | | |
| Sat 15/10/16 | Chadderton v Holker Old Boys | 3-2 | | | | |
| Tue 18/10/16 | Chadderton v FC United of Manchester | 0-6 | | | | |
| Sat 22/10/16 | AFC Emley v Chadderton | 3-1 | | | | |
| Sat 29/10/16 | Holker Old Boys v Chadderton | 3-6 | | | | |
| Sat 05/11/16 | Charnock Richard v Chadderton | 2-0 | | | | |
| Sat 26/11/16 | Maine Road v Chadderton | 1-3 | | | | |
| Sat 03/12/16 | Litherland REMYCA v Chadderton | 2-2 | | | | |
| Sat 10/12/16 | Chadderton v Daisy Hill | 5-4 | | | | |
| Sat 07/01/17 | Chadderton v Alsager Town | 1-3 | | | | |
| Sat 14/01/17 | Daisy Hill v Chadderton | 2-2 | | | | |
| Sat 21/01/17 | Chadderton v Whitchurch Alport | 3-0 | | | | |
| Sat 28/01/17 | Eccleshall v Chadderton | 1-7 | | | | |
| Sat 04/02/17 | Chadderton v FC Oswestry Town | 4-2 | | | | |
| Sat 18/02/17 | Chadderton v Carlisle City | 4-0 | | | | |
| Fri 24/02/17 | Silsden v Chadderton | 1-0 | | | | |
| Sat 04/03/17 | City of Liverpool FC v Chadderton | 5-0 | | | | |
| Sat 11/03/17 | Nelson v Chadderton | 1-3 | | | | |
| Wed 15/03/17 | Bacup Borough v Chadderton | 0-2 | | | |  |
| Sat 18/03/17 | Chadderton v AFC Blackpool | 7-0 | | | | |
| Thu 23/03/17 | St Helens Town v Chadderton | 1-3 | | | | |
| Sat 25/03/17 | Sandbach United v Chadderton | 2-0 | | | | |
| Tue 28/03/17 | Alsager Town v Chadderton | 0-3 | | | | |
| Sat 01/04/17 | Prestwich Heys v Chadderton | 0-0 | | | | |
| Tue 04/04/17 | Chadderton v Charnock Richard | 1-2 | | | | |
| Thu 06/04/17 | City of Liverpool FC v Chadderton | 0-2 | | | | |
| Tue 11/04/17 | Chadderton v St Helens Town | 2-5 | | | | |
| Sat 15/04/17 | Carlisle City v Chadderton | 0-1 | | | | |
| Mon 17/04/17 | Chadderton v Widnes | 1-2 | |  | | |
| Thu 20/04/17 | Chadderton v City of Liverpool FC | 0-2 | | | | |
| Sat 22/04/17 | Ashton Town v Chadderton | 1-4 | | | | |
| Tue 25/04/17 | Atherton LR v Chadderton | 6-1 | | | | |
| Sat 29/04/17 | Chadderton v Eccleshall | 9-0 | | | | |
